Hide navigation sidebar

Hide table of contents sidebar

Toggle site navigation sidebar

Linux for Biologists

Toggle table of contents sidebar

1. About this book
Toggle navigation of 1. About this book
2. Getting started
Toggle navigation of 2. Getting started
- 2.1. An overview of Linux
  Toggle navigation of 2.1. An overview of Linux
- 2.2. Running a Linux desktop
  Toggle navigation of 2.2. Running a Linux desktop
  - 2.2.1. Running Linux as a virtual machine
    Toggle navigation of 2.2.1. Running Linux as a virtual machine
  - 2.2.2. The Desktop
  - 2.2.3. Changing system settings
- 2.3. Available software
  Toggle navigation of 2.3. Available software
- 2.4. Files and directories
  Toggle navigation of 2.4. Files and directories
3. Getting software
Toggle navigation of 3. Getting software
- 3.1. The quick and easy method
  Toggle navigation of 3.1. The quick and easy method
- 3.2. Python packages
  Toggle navigation of 3.2. Python packages
- 3.3. Perl modules
  Toggle navigation of 3.3. Perl modules
- 3.4. R packages
  Toggle navigation of 3.4. R packages
- 3.5. Conda packages
  Toggle navigation of 3.5. Conda packages
- 3.6. Debian packages
  Toggle navigation of 3.6. Debian packages
4. Using the command line
Toggle navigation of 4. Using the command line
- 4.1. Shell and Terminal
- 4.2. An overview of commands
  Toggle navigation of 4.2. An overview of commands
- 4.3. Other useful commands
  Toggle navigation of 4.3. Other useful commands
- 4.4. Editing text files using nano
  Toggle navigation of 4.4. Editing text files using nano
- 4.5. Exercise — using the command-line
  Toggle navigation of 4.5. Exercise — using the command-line
- 4.6. Notes
5. Galaxy
Toggle navigation of 5. Galaxy
- 5.1. Why use Galaxy?
  Toggle navigation of 5.1. Why use Galaxy?
  - 5.1.1. What can you use Galaxy for?
  - 5.1.2. Why run Galaxy on your computer?
- 5.2. Running Galaxy on your computer
  Toggle navigation of 5.2. Running Galaxy on your computer
- 5.3. Registering a user account
  Toggle navigation of 5.3. Registering a user account
  - 5.3.1. Managing your account
- 5.4. Granting admin privileges for user
  Toggle navigation of 5.4. Granting admin privileges for user
6. Reference management
Toggle navigation of 6. Reference management
7. Note-taking
Toggle navigation of 7. Note-taking
8. Glossary
9. Credits

Toggle table of contents sidebar

3.1.1. Requirements#

Attention

This procedure installs software in system paths and so requires administrator privileges.

3.1.2. Finding and installing software

3.1. The quick and easy method

Copyright © 2023, Vimalkumar Velayudhan

Made with Sphinx and @pradyunsg's Furo